diff --git a/debian/rules b/debian/rules
index 6c3e6b5..0bd368f 100755
--- a/debian/rules
+++ b/debian/rules
@@ -52,8 +52,8 @@ FSL_LIBRARY_PATH=$(CURDIR)/lib
 # install into this directory
 DEB_DESTDIR=$(CURDIR)/debian/tmp
 
-# don't compile GPU
-COMPILE_GPU:=0
+# compile GPU only if building on x86 platform where nvcc present
+COMPILE_GPU:=$(shell which nvcc >/dev/null 2>&1 && echo 1 || echo 0)
 
 # define common environment setup for all make calls
 # complicated LD_LIBRARY expression ensures that no
--- a/debian/templates/control
+++ b/debian/templates/control
@@ -16,6 +16,7 @@ Build-Depends: debhelper (>= 7),
                libnifti-dev (>> 1.1.0-1),
                libgiftiio-dev,
                mesa-common-dev,
+               nvidia-cuda-toolkit [amd64 i386],
                libexpat1-dev | libexpat-dev,
                libglu1-mesa-dev | libglu-dev,
                libgomp1,
@@ -91,7 +92,7 @@ Depends: mozilla-firefox | www-browser,
          ${misc:Depends}
 Recommends: fsl-atlases
 Suggests: fsl-feeds,
-          fsl-#FSLMVERSION#-gpu,
+          fsl-#FSLMVERSION#-gpu (= ${binary:Version}),
           octave | ${octave:Depends},
           mriconvert | dicomnifti,
           fsl-complete,
@@ -119,3 +120,19 @@ Description: analysis tools for FMRI, MRI and DTI brain imaging
  FSL interoperates well with other brain imaging related software. This includes
  Caret, FreeSurfer (cortical flattening and modelling). All FSL tools support
  the NIfTI format.
+
+Package: fsl-#FSLMVERSION#-gpu
+Architecture: amd64 i386
+Depends: fsl-#FSLMVERSION#-core (= ${binary:Version}),
+         ${shlibs:Depends},
+         ${misc:Depends}
+Description: GPU-accelerated tools for FSL
+ FSL is a comprehensive library of image analysis and statistical tools
+ for fMRI, MRI and DTI brain imaging data. The suite consists of various
+ command line tools, as well as simple GUIs for its core analysis pipelines.
+ Among others, FSL offers implementations of standard GLM analysis,
+ white matter tractography, tissue segmentation, affine and non-linear
+ co-registration, and independent component analysis.
+ .
+ This package provides accelerated versions of some FSL commands to utilize
+ NVIDIA's CUDA toolkit.
--- a/debian/control
+++ b/debian/control
@@ -16,6 +16,7 @@ Build-Depends: debhelper (>= 7),
                libnifti-dev (>> 1.1.0-1),
                libgiftiio-dev,
                mesa-common-dev,
+               nvidia-cuda-toolkit [amd64 i386],
                libexpat1-dev | libexpat-dev,
                libglu1-mesa-dev | libglu-dev,
                libgomp1,
@@ -91,7 +92,7 @@ Depends: mozilla-firefox | www-browser,
          ${misc:Depends}
 Recommends: fsl-atlases
 Suggests: fsl-feeds,
-          fsl-5.0-gpu,
+          fsl-5.0-gpu (= ${binary:Version}),
           octave | ${octave:Depends},
           mriconvert | dicomnifti,
           fsl-complete,
@@ -119,3 +120,19 @@ Description: analysis tools for FMRI, MRI and DTI brain imaging
  FSL interoperates well with other brain imaging related software. This includes
  Caret, FreeSurfer (cortical flattening and modelling). All FSL tools support
  the NIfTI format.
+
+Package: fsl-5.0-gpu
+Architecture: amd64 i386
+Depends: fsl-5.0-core (= ${binary:Version}),
+         ${shlibs:Depends},
+         ${misc:Depends}
+Description: GPU-accelerated tools for FSL
+ FSL is a comprehensive library of image analysis and statistical tools
+ for fMRI, MRI and DTI brain imaging data. The suite consists of various
+ command line tools, as well as simple GUIs for its core analysis pipelines.
+ Among others, FSL offers implementations of standard GLM analysis,
+ white matter tractography, tissue segmentation, affine and non-linear
+ co-registration, and independent component analysis.
+ .
+ This package provides accelerated versions of some FSL commands to utilize
+ NVIDIA's CUDA toolkit.
