Bug-Database: https://github.com/saezlab/progeny/issues
Bug-Submit: https://github.com/saezlab/progeny/issues/new
Reference:
 - Author: >
    Michael Schubert and Bertram Klinger and Martina Klünemann and Anja
    Sieber and Florian Uhlitz and Sascha Sauer and Mathew J. Garnett
    and Nils Blüthgen and Julio Saez-Rodriguez
   Year: 2018
   Title: >
    Perturbation-response genes reveal signaling footprints in cancer gene expression
   Journal: Nature Communications
   Volume: 9
   Number: 20
   DOI: 10.1186/s13059-020-1949-z
   URL: https://10.1186/s13059-020-1949-z
   PMID: 29295995
   PMCID: PMC5750219 
   ePrint: "https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5750219/\
    pdf/41467_2017_Article_2391.pdf"
 - Author: C. Holland and B. Szalai and J. Saez-Rodriguez
   Year: 2019
   Title: >
    Transfer of regulatory knowledge from human to mouse for functional genomics analysis
   Journal: BBAGRM
   DOI: 10.1016/j.bbagrm.2019.194431.
   URL: https://doi.org/10.1016/j.bbagrm.2019.194431.
 - Author: >
    Christian H. Holland and Jovan Tanevski and Javier Perales-Patón
    and Jan Gleixner and Manu P. Kumar and Elisabetta Mereu and Brian
    A. Joughin and Oliver Stegle and Douglas A. Lauffenburger and Holger
    Heyn and Bence Szalai and Julio Saez-Rodriguez
   Title: >
    Robustness and applicability of transcription factor and pathway
    analysis tools on single-cell RNA-seq data
   Journal: Genome Biology
   Year: 2020
   Month: Feb
   PMID: 32051003
   PMCID: PMC7017576
   DOI: 10.1186/s13059-020-1949-z 
   URL: https://doi.org/10.1186/s13059-020-1949-z 
   Volume: 21
   Number: 1
   Pages: 36
Registry:
 - Name: conda:bioconda
   Entry: bioconductor-progeny
 - Name: bio.tools
   Entry: progeny
Repository: https://github.com/saezlab/progeny.git
Repository-Browse: https://github.com/saezlab/progeny
