#!/bin/bash -ex
pkg=prokka
if [ "$AUTOPKGTEST_TMP" = "" ] ; then
  AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
fi
sh /usr/share/doc/prokka/get-additional-data
prokka --version
prokka --help
prokka --listdb
prokka --cpus $(nproc) --outdir "${AUTOPKGTEST_TMP}"/asm --prefix asm test/plasmid.fna
grep '>' "${AUTOPKGTEST_TMP}"/asm/asm.fna
